The core of our lab work was designing and expressing the recombinant fusion proteins for our test, VeriFied. Seven of our ten recombinant fusion proteins consist of an anti-HSA-nanobody connected to a NanoLuc fragment with a flexible peptide linker. We successfully expressed and extracted five different fusion proteins, and purified one of them. The NanoLuc fragments of our fusion proteins folded functionally in the periplasm as proved by luminescence measurements. You can find more details about our proteins here, our results related to protein expression and purification here, and the protocols we used here.
Our plasmid designs are modular: the nanobody sequences can be swapped for other nanobody sequences targeting either other HSA epitopes or completely different biomarkers, and the NanoLuc fragment can be replaced with another reporter enzyme. This flexibility makes our constructs a useful template for future iGEM teams interested in developing other enzyme fragment complementation assays.
We contributed new experimental data to the understudied, though especially medically relevant, area of HSA oxidation using our own test, VeriFied, Ellman’s assay, and nanoDSF. These findings are preliminary but nonetheless provide indicative data for future teams or researchers working on HSA-related applications.
With VeriFied, we gathered preliminary data indicating that exposure to air over time alters HSA structure in a way that decreases the affinity of the used nanobodies leading to a reduced luminescence signal. With nanoDSF, our preliminary results suggest that oxidized HSA may have a lower conformational stability than reduced HSA. While these findings are not conclusive, they provide a starting point for future studies on HSA oxidation. You can find more about our results here.
We aimed to develop a simple and low-cost method for purifying HSA from blood, focusing on separating it from hemoglobin, which interferes with many analytical methods. Through iterative testing and optimization, we created a protocol that reduces hemoglobin background, improving the reliability of many spectrophotometric measurements.
This protocol may be useful for future iGEM teams or labs seeking accessible approaches to purify HSA from blood. You can find our protocol used for HSA purification here and the related DBTL cycle here.
In Finland, there are no dedicated institutes for forensic science technology. For this reason, our
Human Practices work began by engaging directly with end-users, and along the way our stakeholder list
grew broader. Our primary end-users are crime scene investigators, whose perspectives helped us confirm
the need for our tool, VeriFied, and define the core requirements of the proposed test. Forensic chemists
and police quality managers were the second major stakeholder group we consulted. Their input gave us a
clear picture of existing crime scene analysis techniques and the rigorous process required for
validating new forensic tools. Synthetic biology professionals played a key role in shaping the
scientific solutions behind VeriFied, while lawyers provided essential insights into the justice system,
allowing us to identify the correct application of the test: guiding the pretrial investigation rather
than being used directly in court. Finally, ethics professors helped us rule out ethical concerns related
to both the use of the test and the way it might be communicated or marketed.
We are proud of our Human Practices work! Consulting a wide range of stakeholders supported us at every
step of the project. Our approach considered not only end-users but also the broader field of forensics
and, even widely, the justice system as a whole. For future iGEM teams, we strongly recommend engaging
with multiple groups of stakeholders. In projects with societal impact, especially in forensic
applications, it is vital to understand how a tool fits within the entire system,
not just the immediate user’s workflow.
Our aims with our IHP work were to ensure that our project was not only scientifically feasible but
also ethically sound, legally grounded, and practically useful. By implementing stakeholder feedback
into our design, we wanted our test to be in-demand and responsible. We aimed to understand the
limitations of our approach, clarify where it can and cannot be applied, and align its design with the
actual needs of investigators in the field.
This is why we encourage future teams to:
ABOA’s story began in 2019, and since then, each team has shared a strong focus on education and the
promotion of synthetic biology. Our team
continued this tradition with the aim of inspiring upper secondary students,
who are beginning to explore university programs and make decisions about their future studies.
We started by visiting local upper secondary schools in Turku to introduce students to the basics of
synthetic biology and to possible study paths. At the same time, we carried out surveys that shaped the
development of a Finnish-language educational material package. In creating the package, we additionally
collaborated with Otaniemi High School, which has a national science high school development task, and
with experts from the Lukema network, dedicated to advancing science education. Together,
we ensured the content highlighted real-world applications of biotechnology and synthetic biology, and also included problem-based examples to strengthen concept understanding.
ince the Finnish high schools’ curriculum does not yet allow space for a dedicated synthetic biology
course, we created a flexible resource that can be used for self-study or adapted into existing lessons.
Beyond creating materials, we established a strong foundation of contacts, resources, and ideas to
support future Finnish iGEM teams in continuing our work, advancing synthetic biology education in Finland.
We also engaged with different communities by recording our own podcast, ABOA Archives, on Spotify,
releasing educational posts on Instagram, and creating a game about antibiotic resistance. To reach
the wider public, we organized events for various age groups. Continuing the tradition of past ABOA
teams, we hosted a workshop for children about viruses and vaccines at the Heureka Science Center in
collaboration with the Aalto-Helsinki iGEM team. In Turku, we transformed a local library into a mini
crime laboratory, where visitors could explore the basics of synthetic biology and modern forensic
methods. Through these activities, we aim to inspire future iGEM teams to create engaging and accessible events that spark curiosity and promote mutual learning.