ARALEX
Autocatalyst Recycling via Advanced Leaching Extraction using oXalate
The current problem
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The idea
There are currently two main methods for recycling PGMs:
Pyrometallurgy:
- Is often used industrially due to high recovery rates
- Requires special equipment and high temperatues (up to 2000°C), leading to high energy demands
- Oven needs to be operational continuously, so secondary resources are fed, leading to impurities
- Leads to volatile waste and slag production, like sulfur dioxide emissions, as well as CO and Cl₂ during separation
Hydrometallurgy:
- Milder temperatures and lower energy costs
- Uses chemical leaching with reagents like aqua regia (HCl/HNO₃), cyanides or chloride-based systems, leading to hazardous waste and gas emissions
- Washing stages produce a lot of wastewater [Yakoumis et al, 2021]
Bioleaching offers an environmentally friendly alternative for recycling PGMs. It does not use corrosive chemicals, require high temperatures, nor does it involve emitting hazardous gases. Normally, fungi like A. niger are used to produce organic acids with the ability of forming complexes with PGMs, but we wanted to try using genetically modified bacteria to produce this acid [Pathak et al, 2022].
Organism
Corynebacterium glutamicum
Although in literature Aspergillus niger is often used as a natural oxalic acid producer [Cameselle, 1998], we chose Corynebacterium glutamicum as our production platform. This gram-positive bacterium is a well-established host organism and easy to manipulate genetically. Another reason for our decision towards a bacterial system is the undesirable ability of fungi like A. niger to form spores [Lyu et al, 2025].
In industrial biotechnology, C. glutamicum is well-known for producing amino acids [Bramkamp, 2025] and was recently named „Microbe of the Year 2025“ [VAAM, 2025]. Its significance is also evident in our own institution - many researchers here work with this strain, and their expertise helped us in creating our own production strain C. glutamicum-oahA.
Metabolic Engineering
A common substrate like glucose (yellow) is added to the bacterial suspension. This substrate is consumed by the bacteria. With the help of our inserted gene fragments (red), this uptake is partially converted into oxalic acid by modified metabolic pathways. Corynebacteria are known to store large amounts of metabolic products in the extracellular lumen as an additional substrate source. So as oxalic acid is produced, it is exported into the lumen where it can be detected and further harvested for following leaching of PGMs (blue).
Plasmid
pGiga_oahA
Since C. glutamicum does not produce oxalic acid in its metabolism on its own, the necessary gene needed to be transferred into the bacteria via a vector:
- The Gene for oxalic acid production (encoding oxaloacetate hydrolase/oxaloacetate acetylhydrolase) from Aspergillus niger was synthesized -> oahA-gene
- The gene was amplified and subsequently cloned into pEKEx2 and pPBEx2 shuttle vectors using Gibson Assembly.
pEKEx2 and pPBEx2
pEKEx2 and pPBEx2 are shuttle vectors for E. coli and C. glutamicum used for the production of proteins with the help of IPTG-induction (isopropyl-beta-D-thiogalactopyranoside). The plasmids of our bacteria include the following:
- oahA: encoding oxaloacetate hydrolase/oxaloacetate acetylhydrolase
- KanR: Kanamycin resistance was used for the selection of successfully transformed cells
- LacIq + Tacl promotor: The lacIq gene encodes a variant of the LacI repressor that is expressed at elevated levels, resulting in enhanced repression of the tac promoter. This tight regulation minimizes leaky expression of the target gene under non-induced conditions and enables robust transcriptional activation upon the addition of the inducer IPTG
- M13 fwd / M13 rev: primer binding sites
- pEKEx2 contains the C. glutamicum origin of replication (ori) from pBL1 and the E. coli ColE1 replicon
In comparison
- Weakness of pEKEx2: Leaky gene expression in pEKEx2-derived plasmids due to a less functional LacI repressor with a modified C-terminus and duplicate DNA sequences in the plasmid backbone -> plasmid instability.
- pPBEx2 is a pEKEx2-derivate -> contains a restored lacI gene and has no longer the unnecessary duplicate DNA sequences
To account for possible leakiness in pEKEx2, experiments were always carried out with both variants.
Optimization
In order to optimize the oxalate production, we followed two different approaches:
- Changing the cultivation parameters
- Engineering the strain itself
Since we used a inducible plasmid as carrier for the oxalacetate hydrolysate gene, we tested different induction times and inducer concentrations in our cultivations. This way, we were able to determine the optimal production conditions. The experiments were carried out in BioLector or shake flask cultivations and oxalate production was measured using an enzyme assay.
To obtain a more stable production strain without the need for antibiotic selection, we are planning to integrate the oahA gene into the C. glutamicum genome. For this, we will introduce the gene via NEB Hifi DNA Assembly into the integration vector pK19mobsacB, which will then be electroporated into the bacteria. After selection by antibiotic resistance markers, the confirmed mutants can be tested for oxalate production.
Other not yet realized optimization strategies include the cultivation under nitrogen limitation as well as supplementing e.g. ethanol, since this has been proved to elavate organic acid production in some cases. Another consideration would be transporter engineering to enhance oxalate export. [Zhou et al, 2023; Guillaume et al, 2021]
Chemistry
Coordination chemistry
The current process follows a simple experimental setup:
- Leaching: Oxalic acid and PGM dust are solved in water and the solution is heated up in an oil bath. The duration of the experiment and temperature are varied to find the optimum.
- Distillation: After filtering the solution to get rid of excess PGM dust, the solution is distilled to boil away the water.
- Analysis: Analysis of the samples is performed via Inductively Coupled Plasma – Optical Emission Spectrometry (ICP-OES).
For the future, we did some literature research on how we could improve the leaching rates. One approach we want to try is pre-treating the PGM dust via ultrasound following a Box-Behnken DoE to minimize experimental runs. We'll then perform response surface methodology (RSM) to find the optimum across the parameter space [Karim et al, 2020].
What a final product could look like
References
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