Judging

Bronze Medal

Bronze Medal

Competition Deliverables

For the bronze medal, we completed the Wiki, Presentation Video (posted after Wiki freeze on the iGEM Video Universe), Judging Form and Judging Session (to be assessed during the Grand Jamboree).

Project Attributions

On our attributions page, we acknowledged internal and external attributions to our project.

Contribution

We made several meaningful contributions to the iGEM community spanning wet lab, dry lab, and documentation efforts. These include:

  • Addition of new biological parts to the iGEM Registry, all documented on our parts page.
  • Publication of detailed experimental protocols to support reproducibility and assist future teams working with ASO-based systems. Documented on our experiments page .
  • Development of a user-friendly ASO Design Software Tool (TAUSO)that enables researchers and iGEM teams to design effective antisense oligonucleotides for targeted gene knockdown.
    • Integrates sequence analysis, thermodynamic scoring, and off-target filtering.
    • Supports both therapeutic and research applications.
  • Creation of a practical guide for organizing hybrid mini-jamborees, based on our experience hosting a global hybrid meetup.
    • Provides step-by-step instructions and best practices for combining online and in-person participation.
    • Helps future iGEM teams plan inclusive and impactful events.

Full documentations are available on our contributions page.

Silver Medal

Silver Medal

Engineering Success

In our project Oncoligo, we went through multiple iterations of the Design, Build, Test, Learn Engineering Cycle with nearly every aspect of our project. For more information, visit the engineering page.

Human Practices

Our project was shaped through ongoing engagement with stakeholders including cancer researchers, clinicians, industry professionals, and patients. These interactions guided our design, delivery approach, and therapeutic focus, ensuring that our work remains grounded in clinical and societal needs. Our Human Practices efforts include:

  • Stakeholder engagement: Consulted clinicians, pharmacologists, industry and experts to shape our therapeutic design, delivery strategy, and cancer focus.
  • Patient perspectives: Conducted in-depth interviews with lung cancer patients, whose experiences and feedback guided us to design therapies with lower toxicity, broader applicability across mutation types, and greater accessibility.
  • Clinical relevance: Pivoted from GBM to lung cancer following expert feedback about ASO delivery challenges across the blood–brain barrier.
  • Educational outreach: Founded ISRAGEM, the first national synthetic biology competition for high-school students in Israel, promoting equal access to science.
  • Global collaboration: Hosted the iGEM Global Hybrid Mini-Jamboree Meetup at Tel Aviv University with 12 international teams, fostering worldwide scientific exchange.
  • Community contribution: Created and shared a practical guide for organizing hybrid iGEM meetups to help future teams run inclusive and collaborative events.
  • Public engagement: Presented at scientific conferences and maintained strong social-media outreach to promote synthetic biology and connect with the public.
  • Entrepreneurship & implementation: Completed the Startup Nation Central entrepreneurship program and mentorship under Yair Sakov (TAU) to strengthen our translational and business strategy.

Learn more on our human practices page.

Gold Medal

Gold Medal

Our iGEM team demonstrated excellence in synthetic biology by combining innovative research, interdisciplinary collaboration, and impactful community engagement. From the very beginning, we carefully studied the iGEM judging criteria to ensure that our project adhered to the highest scientific standards. Our project, Oncoligo, pioneers a novel cancer therapy by a modular solution for robust and specific cancer cell death.

Our efforts demonstrate how excellence in synthetic biology goes beyond lab work-it includes building connections between science and society, ensuring that our work is not only innovative but also meaningful and impactful for the world.

Excellence in Synthetic Biology

General Biological Engineering - Our Model

On our Model page, you can explore the engineering process behind our computational model for the antibody–ASO–epitope conjugate platform in cancer therapy.

The Challenges
  • ASO Design: Create antisense oligonucleotides (ASOs) that maximize efficacy while minimizing off-target effects.
  • Target Selection: Identify mRNA transcripts where degradation induces synthetic lethality in cancer cells, leaving healthy cells unharmed.
  • Immune Engagement: Engineer antibodies that can reach lung tumor cells and incorporate epitopes without disrupting antibody structure, enabling both targeted delivery and immune activation.
The Solution

Our computational model integrates novel predictive features and methods not considered in earlier approaches. It provides a ranking framework to select the most promising ASO sequences for a given target.

Key innovations include:

  • Molecular dynamics simulations
  • On-target hybridization efficiency (across different chemical modifications)
  • RNase H–preferred cleavage regions
  • Target mRNA half-life
  • Off-target potential adjusted by expression levels
  • Additional features described in the Methods section

Beyond ASO design, we combined insights from the literature with computational methods — including large-scale data analysis and graph networks — to explore synthetic lethality for cancer-specific target prioritization.

In parallel, we applied established models to optimize antibodies for stable expression, precise targeting, and efficient epitope incorporation, ensuring effective delivery and immune engagement.

The Applications
  • High-confidence ASO candidates: for cancer and genetic diseases
  • Precision target selection: based on tumor-specific vulnerabilities
  • Dual-action therapies: through antibody-guided ASO delivery and immune system activation
  • Scalable synthetic biology tool: for reliable, temporary mRNA degradation

Specializations

Entrepreneurship

We approached entrepreneurship as an integral part of our project, developing a full commercialization strategy for our modular ASO-based cancer therapy. Our work included:

  • Mission & problem focus: Build a safer, modular RNA therapy platform (ASO + antibody + epitope) to address lung cancer’s unmet needs.
  • Customer discovery: Interviews with clinicians, pharmacologists, industry, and patients to validate pain points (toxicity, access, narrow eligibility) and refine product scope.
  • Business model: Therapeutics + enabling platform (co-dev/partnering, licensing of designs/algorithms, and future clinical assets).
  • Competitive differentiation: Multi-component modularity (ASO+antibody+epitope), synthetic-lethality focus, and an advanced computational pipeline (design → rank → safety filter).
  • Patent filing: Submitted a patent covering ONCOLIGO’s modular ASO–antibody–epitope platform design and key innovations.
  • Commercial readiness: Completed Startup Nation Central (SNC) entrepreneurship program;
  • Assets on wiki: Pitch video, one-pager, roadmap & milestones, financial plan, risks analysis, and TAM/SAM/SOM.

This work is detailed on our Entrepreneurship page.

Software

To support the rational design of gene silencing with antisense oligonucleotides (ASOs)- for both therapeutic applications and research - we developed a dedicated ASO design software tool called TAUSO (TAU ASO Generator). The platform enables gene knockdown design in human cell lines, yeast, or E. coli. Users simply select an organism and target gene through an intuitive interface, and the software automatically generates multiple ASO designs ranked by predicted efficacy and safety. Once computation is complete, users receive a structured report directly to their email, including all designed sequences, predicted off-targets, and detailed thermodynamic scores. By creating this software resource, we aim to empower future iGEM teams and researchers working on RNA-based therapeutics and beyond. Full information is available on our Software page.