CONTRIBUTION
Overview

Our project is centered on the construction and optimization of efficient expression systems in Pichia pastoris, with a particular emphasis on contributing well-characterized biological parts to the iGEM community within the domain of synthetic biology. We selected a comprehensive set of high-expression regulatory elements, including promoters AOX1, FDH1, CAT1, and AOX713, as well as signal peptides α-factor, SP4, SP14, and 0030. These components represent either native or engineered promoters and signal peptides of Pichia pastoris, each demonstrated to enhance the expression and secretion efficiency of heterologous proteins. To facilitate the industrial-scale production of the antimicrobial peptide Plectasin NZ2114, we systematically integrated these regulatory elements into the pPIC9K plasmid vector, constructed multiple recombinant expression strains, and performed functional validation, resulting in improved expression levels and bioactivity of Plectasin NZ2114 in Pichia pastoris.

Antimicrobial peptides have emerged as promising alternatives to conventional antibiotics due to their broad-spectrum activity and low propensity for inducing resistance. Heterologous protein expression via genetic engineering offers a viable solution to overcome challenges related to low yield and high production costs. As a safe and highly efficient host for recombinant protein expression, Pichia pastoris relies heavily on the selection of appropriate promoters and signal peptides to leverage its robust secretory pathway. Through systematic evaluation and optimization of these expression components, our work not only advanced the development of high-producing Plectasin NZ2114 strains but also established a validated, modular, and reusable toolkit of expression parts—readily applicable by the iGEM community and other researchers for the scalable production of antimicrobial peptides and other recombinant proteins.

In summary, this study significantly expands the repertoire of functional parts available for Pichia pastoris expression systems. Furthermore, it provides valuable insights and a practical foundation for the rational design of expression constructs in synthetic biology and metabolic engineering. The developed platform holds strong potential to drive future technological advancements and broaden the industrial applications of microbial cell factories.

Parts Collection

Name

Part Number

Type

Description

Plectasin-NZ2114

BBa_25DAT2H3

Basic part

Plectasin, the first fungal Plectasin, the first fungal defensin discovered in 2005, is effective against Gram-positive bacteria without harming human cells or causing antibiotic resistance. NZ2114 is a modified version with three amino acid changes (D9N, M13L, Q14R).

AOX1 promoter

BBa_K5384004

Exist Basic part

The AOX1 promoter is a strong inducible promoter from the alcohol oxidase 1 gene, commonly used for high-level expression of heterologous genes in methanol-utilizing yeast.

FDH1 promoter

BBa_25Y7VR7B

Exist Basic part

The FDH1 promoter is a strong, constitutive promoter derived from the formate dehydrogenase 1 gene, commonly used to drive stable gene expression in yeast.

CAT1 promoter

BBa_250YWZY2

Basic part

The CAT1 promoter is a constitutive promoter and commonly used to drive gene expression in yeast under various conditions.

AOX713 Promoter

BBa_2509YDPZ

Basic part

The AOX713 promoter is a modified version of the AOX1 promoter from Pichia pastoris, induced by methanol to drive high-level expression of target genes.

SP4-alpha-factor signal peptide

BBa_25W90YSW

Basic part

SP14-alpha-factor signal peptide

BBa_25EJSAXC

Basic part

Endogenous signal peptide of Pichia pastoris cells

0030-α-factor SP

BBa_259J4DW3

Exist Basic part

Endogenous signal peptide of Pichia pastoris cells

α-factor SP

BBa_K4077005

Exist Basic part

The alpha factor signal peptide is used in *Pichia pastoris* cells to direct the secretion of recombinant proteins.

pPIC9K-backbone

BBa_252FQI57

Plasmid backbone

pPIC9K is a shuttle vector used in Pichia pastoris for high-level expression of recombinant proteins.

pPIC9K-AOX1-⍺Factor-Plectasin NZ2114

BBa_25P0CGVJ

Composite part

AOX1 promoter drives the expression of Plectasin NZ2114

pPIC9K-FDH1-⍺Factor-Plectasin NZ2114

BBa_25NJWF2D

Composite part

FDH1 promoter drives the expression of Plectasin NZ2114

pPIC9K-CAT1-⍺Factor-Plectasin NZ2114

BBa_25Y7DCBM

Composite part

CAT1 promoter drives the expression of Plectasin NZ2114

pPIC9K-AOX713-⍺Factor-Plectasin NZ2114

BBa_25FBRV07

Composite part

AOX713 promoter drives the expression of Plectasin NZ2114

pPIC9K-AOX1-SP4-Plectasin NZ2114

BBa_25EMVDZF

Composite part

SP4 signal peptide drives the secretion of Plectasin NZ2114

pPIC9K-AOX1-SP14-Plectasin NZ2114

BBa_25YORBVC

Composite part

SP14 signal peptide drives the secretion of Plectasin NZ2114

pPIC9K-AOX1-0030-Plectasin NZ2114

BBa_25D2294J

Composite part

0030 signal peptide drives the secretion of Plectasin NZ2114