Integrated Human Practices

Why We Did Human Practices

Each Human Practices activity shaped our project in unique ways. Click on the boxes below to learn why they mattered.

BioTalks

Conversations with experts guided our decisions.

By interviewing researchers, we gained insights into AlphaFold, structural biology, and applications that shaped our project’s direction.

Entrepreneurship

Exploring real-world applications of our project.

Our commercialization roadmap was designed with input from industry experts, ensuring our technology has practical impact.

Female Scientists

Highlighting inclusivity in science.

We interviewed inspiring female scientists to spotlight challenges and role models, strengthening inclusivity in STEM.

Input from politics

Understanding the influence of legal and public sector.

Input from politics was included in our project to understand how legal regulations and public sector policies influence sustainability requirements and the feasibility of applying our biotechnology in the construction industry.

Other Outreach Activities

Acceptance of Synthetic Biology Approaches in Society.

Introduction

As we developed our bio-cement project, we aimed to address one of the major contributors to climate change: CO2 emissions from traditional cement production, while using synthetic biology to solve the problem.

Especially in synthetic biology, the effects of the project on society, the environment and safety are important to consider. In order to position Pyricon not just as a research project, but as a possible start-up with good anchor points in the actual world, the relevance of Human Practices cannot be dismissed.

In addition, our project is not only placed in the category of synthetic biology, but also in the area of the climate crisis. This sets the long-term goal of using the product on a large scale worldwide. Human Practices guided us to look beyond science alone and consider how our work connects with society, industry, and the environment. All three important aspects that need to be taken into account once a research project is to leave the laboratory in due course.

By engaging with experts and stakeholders, we gained insights that helped us refine our approach, anticipate real-world challenges, and ensure our solution remains both scientifically sound and socially meaningful. That is why we incorporated not only research oriented experts, but gained knowledge through entrepreneurship as well. Input from politics, industry and various universities were also highly important. Not least to understand the processes in market and product management. In addition to global application, the interviews with topic-specific experts in the field of biology helped us to optimize the series of experiments.

Furthermore, their input has influenced the engineering cycles as well. The integration of various perspectives allowed us to design a project that not only advances synthetic biology but also contributes to building a more sustainable future.

BioTalks

Prof. Dr. Kevin Paine

Prof. Dr. Kevin Paine

MICP based construction materials
Aim of Contact
We reached out to Prof. Dr. Kevin Paine (Professor of Infrastructure Materials, University of Bath, and Director of the Centre for Climate Adaptation and Environment Research) because of his extensive experience in developing smart, low-carbon, biomineralizing concrete technologies, especially in microbially induced calcite precipitation (MICP) and self-healing concretes. Our project’s central idea is to embed microbial systems into cementitious materials to reduce cement use and enhance performance, so his insights into practical challenges, scaling, process design, precipitation efficacy, and life-cycle tradeoffs were invaluable for guiding our experimental design and expectations.

Conclusion & Implementation
Our conversation with Prof. Dr. Kevin Paine from the University of Bath proved to be a turning point in the development and refinement of our biocement concept. As an expert in microbially induced calcite precipitation (MICP) and sustainable construction materials, Prof. Paine provided us with deep insights into the current challenges and realistic potentials of bio-based cement alternatives. His feedback helped us critically assess our concept’s technical feasibility and guided us toward a more pragmatic and scalable project direction.

One of the most influential outcomes of this interview was the decision to focus on precast biobricks rather than attempting to apply our technology directly to in situ concrete for large-scale infrastructure. Prof. Paine emphasized that industrial scalability, environmental variability, and bacterial consistency pose major challenges for field applications at this stage, while controlled factory environments are far more suitable for early implementation. This insight reshaped our project goals and allowed us to define a clearer, more achievable development path.

He also encouraged us to explore our idea from an entrepreneurial perspective, identifying realistic market niches where our material could first be applied and tested. Furthermore, his feedback reinforced the relevance of our pyriform silk matrix approach, giving us confidence in our product design and concept for a microbially enhanced composite material.

Overall, Prof. Paine’s expertise not only deepened our understanding of MICP-based cement systems but also directly influenced the strategic direction, feasibility, and scalability of our project. His input helped us address key challenges early on and strengthened both the scientific and entrepreneurial foundations of our work.

Dr. Florian Menzel

Dr. Florian Menzel

Spider silk
Aim of Contact
We contacted Dr. Florian Menzel, an expert on insects and spiders at Johannes Gutenberg University Mainz, to discuss the biological and functional diversity of spider silks, especially pyriform silk, which we aimed to use instead of the more common dragline silk for our biomineralizing composite material. Because pyriform silk functions as an adhesive matrix in natural webs, we considered it a promising biological model for our Bacillus subtilis-based bio-cement system. Dr. Menzel’s extensive knowledge of spider silk biology, particularly of cribellate spiders and the diversity of silk functions, helped us assess the suitability of pyriform silk for our concept and better understand its structural and ecological context.

Conclusion & Implementation
Our discussion with Dr. Florian Menzel from Johannes Gutenberg University Mainz, an expert on spiders and silk biology, was essential in validating one of the most fundamental design choices of our project: the decision to work with pyriform silk instead of the more commonly used dragline silk. At the start of our project, we debated extensively whether to pursue dragline silk for its exceptional tensile strength or pyriform silk for its self-aggregation properties and its natural role as a matrix for adhesive attachment in spider webs.

Through his detailed explanations of the biological diversity and functionality of different spider silk types, Dr. Menzel provided the context we needed to understand the unique advantages of pyriform silk for our material concept. He affirmed that pyriform silk acts as a structural scaffold and binding interface, making it ideally suited for our aim of developing a bio-based cement material where bacterial calcite precipitation serves as the adhesive component.

His feedback gave us confidence and scientific validation for focusing on pyriform silk and reinforced our belief that this less-explored silk type offers distinct functional benefits for our bio-cement approach. This confirmation helped us consolidate our design direction early in the project, allowing us to move forward with a clear and well-founded material choice that aligns with both the biological function and the intended engineering application of our composite system.

Dr. Florian Hof

Dr. Florian Hof

AlphaFold
Aim of Contact
We contacted Dr. Florian Hof, originally a doctoral researcher in structural biology at Johannes Gutenberg University Mainz, to deepen our understanding of AlphaFold and its predictive strengths and limitations. In our project we considered using AlphaFold models to design and interpret our synthetic pyriform silk proteins, but we recognized the pitfalls of overreliance on AI-based structural predictions (misfolded domains, low-confidence regions, misleading interactions). Dr. Hof’s background in biochemistry and structural biology positioned him perfectly to guide us in how to critically interpret AlphaFold outputs, validate structural models, and avoid “overtrusting the black box”. His insights helped us set more reliable decision based on our AlphaFold predictions during our iGEM project.

Conclusion & Implementation
Our discussion with Dr. Florian Hof provided valuable guidance on the use of AlphaFold for structural predictions, including how to critically assess and classify prediction results and interpret confidence scores. He also demonstrated how to use ChimeraX to visualise predicted structures and evaluate pLDDT plots, giving us practical tools to assess prediction reliability and structural detail. This visual and analytical approach allowed us to better understand both global and local structural features of our constructs.

Applying Dr. Hof’s guidance revealed the structural modularity of individual domains within our synthetic pyriform silk protein constructs. This insight prompted us to carefully reconsider the domain arrangement in our designs and to integrate structural modularity as a deliberate design principle. Beyond validating the plausibility of our predicted structures, his guidance also highlighted potential structural relationships that could impact folding, stability, and function.

As a result, his input not only enhanced our interpretation of AlphaFold predictions but also shaped a more deliberate and structural basis for our construct design. This has strengthened our ability to move forward with confidence in selecting and engineering domains that align with the functional and structural requirements of our synthetic silk proteins.

Prof. Dr. Lukas Stelzl

Prof. Dr. Lukas Stelzl

Unstructured proteins and molecule simulations
Aim of Contact
The aim of our contact with Prof. Dr. Lukas Stelzl, an expert in molecular simulations and intrinsically disordered proteins, was to obtain expert feedback and guidance on the structural aspects of our synthetic pyriform silk protein constructs. Since our designed proteins contain extensive unstructured regions with polyproline stretches and polyglutamine motifs, we wanted to draw on Prof. Stelzl’s expertise to support an informed decision-making process during construct design. In particular, we sought to discuss the predicted structural features of our pyriform silk proteins and validate our structure prediction results, while also gaining his perspective on potential self-aggregation tendencies associated with the polyglutamine segments. Furthermore, we aimed to better understand the functional and structural roles of the unstructured regions, including the influence of polyproline and other disordered domains on the overall folding, dynamics, and assembly of the protein. Prof. Stelzl’s expertise in molecular simulations of disordered proteins was therefore considered critical for evaluating our design strategy and for refining our constructs ahead of experimental validation.

Conclusion & Implementation
Our exchange with Prof. Dr. Lukas Stelzl, an expert in molecular simulations and intrinsically disordered proteins, was highly valuable for understanding and interpreting the structural characteristics of our synthetic pyriform silk constructs. He guided us in critically assessing our AlphaFold structure predictions, helping us interpret their confidence scores, the modularity of the predicted domains, and the limitations inherent to AI-based structural models. His feedback enabled us to distinguish between reliable structural features and regions of low predictive confidence, an essential step in refining our construct design.

Prof. Stelzl also provided detailed insight into the functions and biological roles of unstructured protein regions, explaining how such domains often contribute to flexibility, dynamic binding, and self-assembly in natural systems. This helped us better understand the potential behavior of our pyriform silk proteins, which contain extensive unstructured regions, polyglutamine motifs, and polyproline stretches. His input reinforced our confidence that these flexible domains could support the intended aggregation and matrix-forming properties of our constructs.

He further emphasized that this field is still under active research and that clear-cut answers or absolute truths are rarely possible when dealing with intrinsically disordered proteins. Instead, he encouraged us to approach our design and analysis through a data-driven lens, comparing our predictions with published studies and interpreting them cautiously based on available experimental evidence.

Additionally, Prof. Stelzl introduced us to several bioinformatic and simulation tools that could help us evaluate and cross-validate our AlphaFold results, giving us a more comprehensive and scientifically grounded workflow for structural assessment.

Overall, his guidance deepened our understanding of how to interpret complex protein prediction data, strengthened the structural rationale behind our construct design, and equipped us with a critical framework for analyzing unstructured proteins in a realistic biological context.

Dr. Farley Kwok van der Giezen

Dr. Farley Kwok van der Giezen

Assembly of repetitive DNA and genes
Aim of Contact
We contacted Dr. Farley Kwok van der Giezen, an expert in the assembly of repetitive proteins and MoClo systems, to seek feedback on our assembly strategy for synthetic pyriform spider silk genes. Dr. van der Giezen's extensive expertise with repetitive protein assembly, particularly his work with pentatricopeptide repeat (PPR) proteins, and his deep knowledge of hierarchical cloning methodologies made him an ideal consultant to evaluate our approach. Given that pyriform silk genes are exceptionally challenging to work with due to their extreme length and repetitive nature, we wanted to determine whether our strategy represented state-of-the-art methodology and seek expert insights on potential improvements or alternative approaches for handling such complex repetitive sequences.

Conclusion & Implementation
Our discussion with Dr. Farley Kwok van der Giezen provided crucial confirmation and valuable technical guidance for our DNA assembly and protein production strategies. With his extensive experience in the design and expression of repetitive sequences, he helped us critically evaluate and strengthen our modular assembly concept for constructing the synthetic pyriform silk genes. His feedback affirmed that our approach was both innovative and methodologically sound, offering a scalable route to build complex repetitive constructs while confirming that we had not overlooked any simpler or more effective alternatives.

In addition to validating our assembly concept, Dr. van der Giezen shared practical advice on how to mitigate common challenges in producing highly repetitive proteins, such as instability, misfolding, and proteolytic degradation. He suggested several solutions, including careful strain selection, amino acid supplementation, and the use of protease-deficient expression strains to improve yield and stability. We were able to directly implement some of these strategies into our production workflow and planned others for future optimization cycles.

Overall, Dr. van der Giezen’s input strengthened both our theoretical foundation and our experimental planning. His feedback not only reinforced confidence in our novel assembly concept but also provided actionable solutions to enhance protein production, helping us refine our methodology and set a solid basis for continued improvement of our system.

VAAM

VAAM 2025 Conference

General & applied Microbiology
In early 2025, three of our team leaders - Lilli, Marcel, and Constantin - represented our team at the VAAM Annual Conference (Association for General and Applied Microbiology). There, they presented our project and the current design progress of our synthetic pyriform silk and biocement concept.

Attending VAAM offered us an excellent opportunity to connect with researchers, industry professionals, and fellow students working on microbial materials, biotechnology, and synthetic biology. We received valuable feedback on potential alternative production hosts for our synthetic proteins and discussed different biological approaches to biocement formation, including fungal systems.

The exchange at VAAM not only broadened our technical perspective but also helped us reflect critically on our current strategy and identify backup approaches in case we encounter experimental challenges. The insights and connections gained during the conference significantly strengthened our project development and ensured a more resilient and well-rounded research plan moving forward.

Susanne Gebhard

Prof. Dr. Susanne Gebhard

Overcoming Limits in MICP‑Based Materials via Protein Fiber Additives
Aim of contact
Susanne Gebhard is a professor of molecular biotechnology at the Johannes Gutenberg University in Mainz and her research is on bacteria in general. They specifically have two research projects, one where they're trying to understand molecular mechanisms of antibiotic resistance and a very different second project where they are looking at biomineral formation by bacteria and how we can use that in sustainable construction materials.

Conclusion & Implementation
Our interview with Prof. Dr. Susanne Gebhard confirmed that combining MICP with fibrous adhesive polymers is a promising approach to overcome the main limitation of Engineered Living Materials, insufficient structural strength. Spider silk proteins offer unique biomechanical propertoes that can enhance biomineralisation, while Bacillus subtilis is a proven host for scalable protein production. Her insights highlighted the technical challenges of co-culturing different bacteria and stressed the importance of precise genetic regulation, which strongly shaped our project design.

Throughout our project, we implemented Prof. Gebhard’s feedback as a guiding principle. Her advice on genetic regulation regarding B. subtilis and our MICP strain Solibacillus silvestris CGN12 was particularly valuable, helping us optimise prototypes and refine our approach. Instead of shifting to a cell-free strategy, we decided to include a mazEF-type kill switch, already established by other iGEM teams, to prevent environmental spread of GMOs. Based on her and Prof. Dr. Kevin Paine’s feedback, we also adjusted our target markets toward less strictly regulated regions such as Switzerland and parts of Africa, and reoriented our application concept toward precast biocement blocks that could be sterilised before release. Her guidance, together with her emphasis on science communication and education, allowed us to shape the project holistically, resulting in a comprehensive approach that balances innovation, safety, and societal impact.

Dr. Karin Parrotta - Azentha

Dr. Karin Parrotta - Azentha

Reptitive DNA synthesis
Aim of Contact
The aim of our contact with Dr. Karin Parrotta and her team at Azentha, specialists in gene synthesis, was to ensure that our synthetic pyriform silk sequences could realistically be produced despite their size and repetitive nature. Their expertise was crucial, since even the smaller gene fragments we designed for modular assembly contained challenging repetitive elements. After reviewing our designs, Azentha successfully synthesized these smaller pyriform silk parts, which we then used as building blocks to iteratively construct larger synthetic pyriform silk genes. This collaboration was an essential step in making our project experimentally feasible, as it provided both validation of our design strategy and the material basis to start our lab work

Conclusion & Implementation
Our collaboration with Dr. Karin Parrotta and her team at Azentha was crucial in transforming our design concept into an experimentally achievable reality. Based on their feedback and the insights we had gathered from previous expert engagements, we were able to strategically break down the full-length ~12,000 bp pyriform silk gene into three smaller, more manageable fragments that could be synthesized economically while maintaining the repetitive and modular character of the sequence.

This synthesis strategy not only overcame the main technical challenge of working with large repetitive genes but also validated the scalability and flexibility of our modular assembly system. The smaller pyriform silk parts synthesized by Azentha served as foundational building blocks for the iterative construction of larger and more complex variants, allowing us to efficiently explore different design versions.

Their expertise ensured that the sequences were optimized for successful synthesis and stability, helping us avoid costly and time-intensive redesigns. As a result, we could begin our laboratory work with a solid genetic foundation and a synthesis strategy that aligned perfectly with our modular cloning approach. This collaboration therefore marked a major implementation milestone, transforming our theoretical gene designs into tangible DNA constructs and establishing the basis for all subsequent experimental phases of our project.

Dr. Georg Fritz

Dr. Georg Fritz

Modular Cloning
Aim of Contact
The aim of our contact with Dr. Georg Fritz and his research group was to obtain expert guidance and practical resources for establishing and applying the Modular Cloning (MoClo) system within our project. Given his group’s extensive experience with synthetic biology, genetic circuit design, and bacterial engineering, as well as Dr. Fritz’s interdisciplinary background spanning theoretical physics and microbiology, we sought his insights to help us implement a reliable and flexible cloning framework for our construct design.

Dr. Fritz and his team provided us with valuable MoClo-related resources, including plasmids that served as a starting point for our cloning work. Their expertise and willingness to share materials enabled us to rapidly adopt the MoClo system and integrate it into our workflow for assembling and testing synthetic spider silk constructs.

Conclusion & Implementation
Our exchange with Dr. Fritz and his group was pivotal in enabling the successful implementation of the MoClo system in our project. The plasmids and information they provided allowed us to establish a standardized and modular cloning workflow, ensuring compatibility and flexibility across different construct designs.

Building on their resources, we developed our own RFC1000-compatible plasmids, which served as a versatile platform for complex assemblies and facilitated the systematic testing of various synthetic spider silk constructs. This modular framework streamlined our cloning process, improved reproducibility, and made it easier to integrate secretion tags and other functional modules.

Beyond the practical benefits, the collaboration also strengthened our understanding of synthetic circuit design principles and modular biological engineering, reinforcing the theoretical and methodological foundations of our construct development. Dr. Fritz’s interdisciplinary approach provided us with both the conceptual and technical tools to design and assemble complex constructs efficiently, directly contributing to the experimental success and scalability of our system.

Prof. Dr. Tracy Palmer

Prof. Dr. Tracy Palmer

Secretion in B. subtilis
We reached out to Professor Tracy Palmer, Professor of Microbiology at Newcastle University, to tap into her deep expertise in bacterial protein secretion systems. Our project originally aimed to secrete our synthetic pyriform spider-silk proteins in B. subtilis from an early stage, as secretion could simplify downstream processing and avoid intracellular folding bottlenecks. After encountering failures in intracellular expression, we pivoted toward a secretion-based strategy, but to make that workable, we needed expert insight on which secretion pathways, signal peptides, and system constraints are realistic in B. subtilis. Professor Palmer’s foundational work on Sec, Tat, and other bacterial secretion systems made her an ideal collaborator for guiding our design decisions.

Conclusion & Implementation
Our interview with Prof. Dr. Tracy Palmer provided us with crucial guidance on how to approach the secretion of our synthetic pyriform silk proteins in Bacillus subtilis. Her detailed explanations of the Sec and Tat secretion pathways helped us understand the molecular mechanisms behind protein export and the limitations associated with each route. Based on her advice, we decided to use the Sec pathway for our secretion strategy, as it is best suited for large, partially unstructured proteins such as our synthetic spidroins.

Prof. Palmer also highlighted the importance of selecting an appropriate signal peptide to ensure efficient export, which led us to get in touch with Prof. Dr. Thomas Wiegert, an expert on secretion signal sequences, for further guidance. This connection directly influenced our construct design and was a key step toward making our secretion approach feasible.

Another invaluable contribution from Prof. Palmer was her suggestion to use a split NanoLuc luciferase assay for detecting secreted proteins. This method offered a highly sensitive and reliable way to confirm secretion even when protein concentrations were low. Following her recommendation, we collaborated with Dr. Margarethe Schwarz (Promega) to implement and optimize this system in our experiments. Ultimately, this assay enabled us to successfully detect the secretion and production of our spidroins—a major milestone in our project.

Prof. Palmer’s insights thus had a direct and lasting impact on both the theoretical and practical aspects of our work, guiding our secretion strategy, establishing key collaborations, and providing us with the tools necessary to verify the success of our design experimentally.

Dr. Jolanda Neef

Dr. Jolanda Neef

Multi-copy secretion in B. subtilis
The aim of our contact with Dr. Jolanda Neef, an expert on secretion in Bacillus subtilis, was to obtain critical resources and guidance for developing an effective secretion strategy for our synthetic spider silk constructs. Dr. Neef provided us with the pBSMuL plasmid, which harbors the sslipA secretion signal peptide, a signal that she had previously worked with successfully. Her insights on secretion signal specificity, particularly the fact that secretion signals typically co-evolve with their target proteins and may not universally function across different constructs, were invaluable.

This exchange served as the foundation for testing our multi-copy secretion strategy and initiating our assessment of protein secretion efficiency in B. subtilis. It enabled us to move forward with both the experimental design and the development of tools to facilitate systematic testing of secretion constructs.

Conclusion & Implementation
From this contact, we gained both a valuable plasmid tool and essential expert insights that shaped our experimental approach. Using the pBSMuL plasmid as a basis, we developed a MoClo-ready plasmid (pLIMO) for level 1 MoClo assemblies. This plasmid enabled us to systematically test a variety of synthetic spider silk constructs in a multi-copy expression context, assessing secretion efficiency with the sslipA secretion signal and later ssyoaW secretion signal tag.

Dr. Neef’s cautionary advice regarding signal specificity guided our experimental design, encouraging us to adopt a comparative approach rather than relying solely on a single secretion signal. This led to a broader testing framework that strengthens our ability to identify optimal secretion strategies for different spider silk constructs.

Our work with Dr. Neef thus not only provided a practical tool for secretion testing but also shaped our conceptual approach to secretion signal selection, informing the next stages of construct development and optimization.

Prof. Dr. Thomas Wiegert

Prof. Dr. Thomas Wiegert

Universal secretion signal peptides
Aim of contact
The aim of our contact with Prof. Dr. Thomas Wiegert, an expert on secretion in Bacillus subtilis, was to gain expert insight into secretion strategies and to explore alternative secretion signal systems for our synthetic spider silk constructs. Prof. Wiegert introduced us to the YoaW signal peptide–StrepII–SUMO system, a versatile secretion tag that facilitates broader applicability by optimising the signal peptide function in combination with a fusion tag positioned ahead of the target protein sequence.

We also sought his expertise regarding the evaluation of secretion signals, particularly bioinformatic approaches and important criteria to consider when selecting and designing secretion tags. His guidance was critical in refining our conceptual framework for secretion signal selection and improving the design of our constructs.

Conclusion & Implementation
Our discussions with Prof. Wiegert provided both conceptual insight and a practical secretion strategy. His YoaW–StrepII–SUMO system inspired the integration of this secretion signal tag into our spider silk constructs, offering a more universal secretion approach.

Furthermore, his guidance on bioinformatic evaluation of secretion signals directly informed our selection process, allowing us to incorporate computational criteria into our design strategy and compare the available secretion signal sequences we had. This led to the integration of the YoaW secretion system into our constructs, which later proved functional as we successfully detected their secretion via the NanoLuc assay.

Prof. Wiegert’s input thus contributed to both a broadened conceptual understanding of secretion signal design and the practical implementation of a robust secretion system for our synthetic spider silk proteins.

Section2

Credit: Kilian Blees

Dipl.-Ing. Tim Gemünden

Construction industry
Aim of contact
We contacted Mr. Tim Gemünden, Managing Partner of TT Holding and owner of his family construction and real estate business, which operates under TT Holding and has been active in construction, real estate development, and property management for over 140 years. As a business owner with over a century of expertise in the construction sector, he provided a practical, market-oriented perspective on the feasibility of implementing new materials like our bio-cement in real-world applications. Our goal was to learn what technical, economic, and regulatory requirements a sustainable building material must meet to be considered viable in the construction industry. Through this exchange, we also hoped to gain insights into market expectations, certification standards, and cost competition in Germany, as well as explore potential entry points and niches for bio-based materials in an established industry.

Conclusion & Implementation
Our conversation with Mr. Gemünden was invaluable in aligning our scientific development with the realities of the construction industry. He provided us with a clear picture of the economic and regulatory landscape that determines whether a new building material can succeed on the market. While he recognized a growing interest in sustainable materials, he emphasized that economic feasibility, scalability, and compliance with established standards remain decisive for practical adoption.

Mr. Gemünden highlighted that concrete’s dominance stems from its affordability, availability, and strong mechanical properties. For a bio-cement alternative to be competitive, it must demonstrate sufficient compressive strength, curing stability, weather resistance, and proper alkalinity, which are critical for reinforcement compatibility and long-term durability. He advised us to begin with small-scale applications, such as decorative elements, paving stones, or pipes, to gradually validate our process before scaling up to structural uses. This advice directly supported our decision to focus on precast bio-bricks as a realistic first product and testing platform.

Beyond providing detailed insight into technical and market requirements, Mr. Gemünden also connected us with experts from Hochschule Mainz, including Prof. Dr.-Ing. Heiko Merle, who offered to test our prototypes once available and invited us to visit a concrete laboratory. This collaboration laid the groundwork for future material testing and validation, bridging our research with practical engineering expertise.

Ultimately, this interview gave us both scientific and entrepreneurial direction, helping us understand the scale, standards, and market dynamics that shape the construction sector. Mr. Gemünden’s feedback was instrumental in refining our bio-cement concept into a more feasible and industry-aligned innovation, providing the perspective of a potential end-user and stakeholder in sustainable construction.

Dr. Margarethe Schwarz - Promega

Dr. Margarethe Schwarz - Promega

Nano-Glo® HiBiT Extracellular Detection System
Aim of contact
We contacted Dr. Margarethe Schwarz, Area Manager at Promega, because of her extensive experience with Promega’s bioluminescence-based detection systems and their application in biological research. After learning about the split NanoLuc luciferase assay from Prof. Dr. Tracy Palmer, we reached out to Dr. Schwarz to explore how Promega’s Nano-Glo® Extracellular Detection System could be applied to our project. Our goal was to establish a sensitive and reliable method to detect the secretion of our large synthetic pyriform silk (spidroin) proteins produced in Bacillus subtilis, which had proven challenging to confirm with conventional detection methods such as SDS-PAGE or Western blotting.

Conclusion & Implementation
Dr. Schwarz’s expertise and practical guidance were crucial for the successful implementation of the split NanoLuc luciferase assay in our project. During her visit to our lab, she evaluated the feasibility of our use case and provided detailed advice on experimental controls, assay optimization, and signal validation, ensuring that our setup would yield reliable and interpretable results.

Based on her input, we introduced the PEP86 tag into our constructs, an essential element required for the Nano-Glo® Extracellular Detection System to function. Thanks to our flexible modular cloning (Pyricloning) approach, we were able to seamlessly integrate this tag into our existing designs without extensive redesign. With this adaptation, we successfully established the assay and achieved a clear luminescent signal confirming spidroin production and secretion in Bacillus subtilis for the first time.

This represented a major milestone in our project, turning theoretical design into measurable experimental success. Dr. Schwarz’s support not only enabled the realization of a key detection strategy but also validated the versatility of our construct design system. Her guidance directly contributed to one of the most important breakthroughs in our experimental workflow and provided a foundation for future applications of the NanoLuc system in protein secretion studies.

Input from politics

Section3

Ministry of Finance (Construction Department) - Represented by Robert Plail

Introduction
The public sector plays an important role as a client in the construction sector, for example in the areas of social housing and infrastructure. The question aimed to gain an understanding of the extent to which the public sector already takes sustainability aspects into account in its planning and procurement. The public sector plays a significant role as a client in the construction industry. As such, it is often involved in new developments and uses legislation to set the framework within which the entire industry operates. We are aware that the answers to our problem can only be used as a basis for decision-making to a limited extent. This is due to the fact that, under current legal regulations in Germany and the EU, the release of genetically modified organisms is not readily feasible. Germany and the European Union are therefore not target markets for us either.

Entrepreneurship

from idea to product

From idea to a product

Introduction

Every journey starts with an idea or hypothesis. If experiments confirm it, this leads to new knowledge, often with significant impact within the scientific community. But only a few ideas make the leap into the real world – becoming a product or technology used by millions of people, creating truly large-scale impact. It's this positive impact that really matters. On the path from idea to product, you engage with potential customers, users, and investors. Their feedback helps refine and adapt the idea to real needs. So, turning an idea into a successful product requires constant interaction and collaboration with people from different backgrounds.

Dr. Andreas Schneider

Dr. Andreas Schneider

Entrepreneurship & Buissnesplan development
Our exchange with Dr. Andreas Schneider, a founder of a biotech company, played a major role in shaping the entrepreneurial development of our project. As we began translating our scientific concept into a viable product idea, Dr. Schneider guided us through the fundamentals of developing a business plan, helping us understand what investors and industry partners expect when evaluating early-stage innovations.

He strongly emphasized the importance of stakeholder engagement as a foundation for successful product development. According to him, identifying the real needs of potential customers is essential, since no company will invest in or purchase a product that does not address a concrete problem. This advice encouraged us to proactively reach out to professionals in construction, material science, and sustainability to better understand how our bio-cement could provide genuine value in their respective fields.

Dr. Schneider also underlined that sustainability alone is not a sufficient selling point. While environmental benefits are increasingly valued, a product must remain competitive in both performance and cost to achieve long-term economic success. This pragmatic view helped us refine our messaging and set realistic development goals that balance innovation with feasibility.

Furthermore, he provided detailed feedback on our existing entrepreneurial concepts and advised us to focus on one specific product or niche application before expanding to broader markets. Narrowing our scope, he explained, would make it easier for investors and stakeholders to assess the potential of our technology and envision its path to implementation.

His input directly inspired the creation of our first pitch deck, which we later presented to potential supporters and stakeholders such as XynaBio. This marked a major step toward professionalizing the entrepreneurial aspect of our iGEM project and positioning our bio-cement concept within a realistic innovation framework.

David Weiß

David Weiß

Market analysis
During the Student Idea Competition, we had the opportunity to meet David Weiß, an experienced entrepreneur with extensive experience in conducting market analyses and navigating the startup landscape. We reached out to him for specific guidance on how to approach the market analysis for our bio-cement project efficiently and realistically.

In our discussion, David explained how to structure a meaningful market analysis without relying on costly commercial reports, which often provide broad or unfocused data. Instead, he advised us to identify accessible and relevant resources to collect information tailored to our niche. His practical insight helped us understand which data is truly useful for an early-stage biotech project and where to find it.

He also cautioned us not to get lost in abstract numbers such as total market values or TAM/SAM/SOM projections. Instead, he encouraged us to focus on developing a solid business plan and deriving realistic, achievable scales and metrics from our own concept and stakeholder feedback. This approach, he explained, would make our analysis both credible and actionable.

Moreover, David emphasized the importance of direct stakeholder engagement to identify concrete needs and requirements for our product. By talking to potential users and industry professionals, we could define our target market and niche more precisely, which would later simplify and strengthen our market evaluation. He also advised us to examine competitors and potential strategic partners within these niches to better understand the market landscape and possible collaboration opportunities.

Overall, this consultation gave us a clearer, more structured approach to market analysis and helped us prioritize practical and data-driven steps in developing our entrepreneurial strategy.

Interviews with female scientists

Section1

Laura Wiens

PhD student
Laura is a 28 years old PhD student in Prof Susanne Gebhard's research group for two years now. She started studying molecular biology in 2016, then joined Prof. Dr. Ralf Heermann's research group, wrote her Master's thesis there and then joined Susanne Gebhard's microbiology group.

Lara_Schön

Lara Schön

PhD student
Lara is a 26 years old PhD student at the Institute for Biotechnology and Drug research (IBWF), in Mainz. For fun, she teaches kids to dance.

Antea Dulaj

Antea Dulaj

PhD student
Antea is a 28 years old PhD student from Albania. She finished her Bachelor´s degree in Albania, then moved to Mainz to complete her Master´s degree in Molecular Biotechnology at the Johannes Gutenberg University. Afterwards, she got a PhD position offered at IBWF.

Carla Schmidt

Prof. Dr. Carla Schmidt

Professor of Biochemistry
Prof. Dr. Carla Schmidt is a professor of biochemistry in Mainz at Johannes Gutenberg University in the Department of Chemistry. She has been there for three years. Before that, she was a junior professor of biochemistry in Halle. She started with a classical chemistry education, i.e. she studied chemistry, but she drifted more and more into bioanalytics and biochemistry and also discovered her passion for mass spectrometry. Mass spectrometry is a method that can be used for many different things. They use it for structural analyses, i.e. they study how proteins and protein complexes are structured, how proteins interact, and whether there are structural changes in such questions. They are particularly interested in the protein-lipid complexes in the neuronal synapse.

Other Activities

Science Slam

Science Slam and Pop-up Stand

Outreach to public

As part of our Human Practices efforts, we actively sought to connect with the public through engaging, face-to-face outreach formats, most notably, by participating in a science slam and organising a pop-up stand in downtown Mainz.

The science slam provided a dynamic platform to present our project in an entertaining and accessible format. Speaking to a broad and diverse audience beyond the traditional scientific community allowed us to bring synthetic biology to life in a way that was both informative and relatable. The conversations and feedback we received were incredibly valuable, encouraging us to reflect more deeply on the societal context of our work and highlighting the importance of clear, inclusive communication.

In parallel, our pop-up stand created an informal, approachable setting for engaging passersby of all ages and backgrounds. This outreach activity sparked curiosity, opened dialogue, and gave us insight into public perceptions, questions, and misconceptions that formal presentations often overlook. Visitors’ reactions helped us better understand how our work is viewed by non-specialists and how we might tailor our message for clarity, relevance and impact.

Both activities underscored the importance of accessible science communication in building public trust and awareness. By stepping out of academic spaces and into the public sphere, we fostered transparency, received diverse feedback, and ensured that societal perspectives actively shape the ongoing development of our project. These experiences reinforced our commitment to Human Practices as a continuous, two-way dialogue between science and society.

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