Overview
In this study, we contributed 10 new parts to iGEM, including 5 basic parts and 5 composite parts. Using these 10 new parts, along with 4 previously existing basic parts, we successfully expressed the AsCpf1 (Cas12a) protein and prepared standard simulated samples for detecting the c.520G>A and c.6745C>T mutations in the COL7A1 gene, which are associated with Dystrophic Epidermolysis Bullosa (DEB). Building on these components, we developed fluorescence detection and test strip detection platforms for the c.520G>A and c.6745C>T mutations, using RPA and engineered Cas12a for expression and purification. These platforms represent a novel, portable, low-cost, and low-equipment-dependent solution, offering a significant contribution to society by improving disease detection rates, enabling early diagnosis, and supporting clinical decision-making, ultimately benefiting human health.
The relevant parts are listed in Table 1. Among them, the first four (BBa_K3521000, BBa_K3521002, BBa_K3521004, BBa_K3584001) are pre-existing parts, while the others are new parts contributed by this study.
Table 1. The relevant parts.
Part number |
Part name |
Contribution type |
Part type |
BBa_K3521000 |
T7 promoter |
basic part |
Regulatory |
BBa_K3521002 |
T7 terminator |
basic part |
Terminator |
BBa_K3521004 |
pet28a-backbone |
basic part |
Plasmid_Ba |
BBa_K3584001 |
His tag-Lac operate-T7 tag |
basic part |
Tag |
BBa_25GBCNYZ |
AsCpf1 |
basic part |
Coding |
BBa_250ZZSEH |
pET28a-AsCpf1 |
composite part |
Plasmid |
BBa_259OXPJX |
c.520G>A |
basic part |
Coding |
BBa_25QUOU62 |
c.520G |
basic part |
Coding |
BBa_2593FMVL |
c.6745C>T |
basic part |
Coding |
BBa_2584X1ZC |
c.6745C |
basic part |
Coding |
BBa_25A2GFYI |
pET28a-c.520G>A |
composite part |
Plasmid |
BBa_25XMA9IE |
pET28a-c.520G |
composite part |
Plasmid |
BBa_25LN1XT0 |
pET28a-c.6745C>T |
composite part |
Plasmid |
BBa_25WJ6OVG |
pET28a-c.6745C |
composite part |
Plasmid |