PART COLLECTION

Overview

In this study, we contributed 10 new parts to iGEM, including 5 basic parts and 5 composite parts. Using these 10 new parts, along with 4 previously existing basic parts, we successfully expressed the AsCpf1 (Cas12a) protein and prepared standard simulated samples for detecting the c.520G>A and c.6745C>T mutations in the COL7A1 gene, which are associated with Dystrophic Epidermolysis Bullosa (DEB). Building on these components, we developed fluorescence detection and test strip detection platforms for the c.520G>A and c.6745C>T mutations, using RPA and engineered Cas12a for expression and purification. These platforms represent a novel, portable, low-cost, and low-equipment-dependent solution, offering a significant contribution to society by improving disease detection rates, enabling early diagnosis, and supporting clinical decision-making, ultimately benefiting human health.

The relevant parts are listed in Table 1. Among them, the first four (BBa_K3521000, BBa_K3521002, BBa_K3521004, BBa_K3584001) are pre-existing parts, while the others are new parts contributed by this study.

Table 1. The relevant parts.

Part number

Part name

Contribution type

Part type

BBa_K3521000

T7 promoter

basic part

Regulatory

BBa_K3521002

T7 terminator

basic part

Terminator

BBa_K3521004

pet28a-backbone

basic part

Plasmid_Ba

BBa_K3584001

His tag-Lac operate-T7 tag

basic part

Tag

BBa_25GBCNYZ

AsCpf1

basic part

Coding

BBa_250ZZSEH

pET28a-AsCpf1

composite part

Plasmid

BBa_259OXPJX

c.520G>A

basic part

Coding

BBa_25QUOU62

c.520G

basic part

Coding

BBa_2593FMVL

c.6745C>T

basic part

Coding

BBa_2584X1ZC

c.6745C

basic part

Coding

BBa_25A2GFYI

pET28a-c.520G>A

composite part

Plasmid

BBa_25XMA9IE

pET28a-c.520G

composite part

Plasmid

BBa_25LN1XT0

pET28a-c.6745C>T

composite part

Plasmid

BBa_25WJ6OVG

pET28a-c.6745C

composite part

Plasmid